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Results

From the first to third period of the project (May 2015 2016-April 2019) the following work has been done:

WP1

 

WP1

Creation, development and maintenance of ENSAT-HT clinical data capture model and maintenance of online registry supporting data capture, biomaterial transfer inventory and connection to ENSAT registry have been done. Advanced functionality includes the development of pairing algorithm for secondary study and the bulk upload of extended retrospective clinical data.

A Research Data Management Platform (RDMP) has been deployed and populated with 7 omics datasets recently provided by collaborators along with its provenance. Procurement, installation and configuration of infrastructure and hardware, for hosting omics data within Safe Heaven environment have been completed.

The Automated Multi-omics Integrative Pipeline is developed and successfully deployed on the hardware. This pipeline accesses the ENSAT-HT omics datasets through RDMP Software. It is used for the extensive analysis of multiomics data under different scenarios. The best feature selection methods and machine learning algorithms for each scenario are finalised. Multiomics signatures were identified which provide high classification accuracies.

WP2
WP3
WP4
WP5
WP6
WP7

Union’s Horizon 2020

This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 633983

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